MolNFT v1 · #171091 · protein
Crystal structure of human monoamine oxidase B in complex with diphenylene iodonium (dpi)
6YT2: “Crystal structure of human monoamine oxidase B in complex with diphenylene iodonium (dpi)”. X-ray diffraction, 3 ligands (FAD, PJW, C15). MolNFT v1 #171091 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YT2
- Type
- protein
- Length
- 995 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P27338
- Ligands
- FAD, PJW, C15
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 500 | — | P27338 |
| B | — | protein | 495 | — | P27338 |
Ligands and binding sites
- FAD · Flavin-adenine dinucleotide · ligand · 2 copies · chains A, B
- PJW · benzo[b][1]benziodole · ligand · 2 copies · chains A, B
- C15 · N-dodecyl-N,N-dimethyl-3-ammonio-1-propanesulfonate · ligand · 2 copies · chains A, B
- GOL · Glycerol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YT2 · Crystal Structure of human monoamine oxidase B in complex with Diphenylene iodonium (DPI) · the same entry in another collection · chain A against A, TM-score 1.00
- P27338 · AlphaFold monomer V2.0 prediction for amine oxidase [flavin- containing] B (P27338) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P27338
- Elsewhere: RCSB PDB 6YT2 · PDBe 6YT2 · UniProt P27338
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