MolNFT v1 · #170989 · protein
The C146A variant of an amidase from pyrococcus horikoshii with bound glutaramide
6YPA: “The C146A variant of an amidase from pyrococcus horikoshii with bound glutaramide”. X-ray diffraction, 1 ligand (P6W). MolNFT v1 #170989 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YPA
- Type
- protein
- Length
- 1,059 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O58376
- Ligands
- P6W
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 263 | — | O58376 |
| B | — | protein | 269 | — | O58376 |
| D | — | protein | 264 | — | O58376 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YPA · The C146A variant of an amidase from Pyrococcus horikoshii with bound glutaramide · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O58376
- Elsewhere: RCSB PDB 6YPA · PDBe 6YPA · UniProt O58376
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