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The C146A variant of an amidase from pyrococcus horikoshii with bound glutaramide

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PDB: 6YPA
Type: protein
Length: 1,059 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: O58376
Ligands: P6W

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	—	protein	263	—	O58376
B	—	protein	269	—	O58376
D	—	protein	264	—	O58376

Ligands and binding sites

P6W · pentanediamide · ligand · 4 copies · chains A, B, C, D
GOL · Glycerol · additive · chains A, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6YPA · The C146A variant of an amidase from Pyrococcus horikoshii with bound glutaramide · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O58376
Elsewhere: RCSB PDB 6YPA · PDBe 6YPA · UniProt O58376

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