MolNFT v1 · #170945 · protein

Cam-P458 complex (crystal form 1)

6YNU: “Cam-P458 complex (crystal form 1)”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #170945 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6YNU
Type: protein
Length: 340 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P0DP23, A0A380ZZA1
Ligands: CA

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	—	protein	146	—	P0DP23
B, D	—	protein	24	—	A0A380ZZA1

Ligands and binding sites

CA · Calcium ion · metal · 9 copies · chains A, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6YNU · CaM-P458 complex (crystal form 1) · the same entry in another collection · chain A against A, TM-score 1.00
P0DP23 · AlphaFold monomer V2.0 prediction for calmodulin-1 (P0DP23) · a predicted model of the same protein · chain A against A, TM-score 0.62

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0DP23
Every structure of UniProt A0A380ZZA1
Elsewhere: RCSB PDB 6YNU · PDBe 6YNU · UniProt P0DP23 · UniProt A0A380ZZA1

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