MolNFT v1 · #170827 · protein
Structure of the AMPA receptor GLUA2O ligand-binding domain (S1S2J) in complex with the compound (S)-1-(2'-amino-2'-CARBOXYETHYL)FURO[3,4- D]PYRIMIDIN-2,4-dione at resolution 1.47A
6YK6: “Structure of the AMPA receptor GLUA2O ligand-binding domain (S1S2J) in complex with the compound…”. X-ray diffraction, 4 ligands (OUB, LI, SO4). MolNFT v1 #170827 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YK6
- Type
- protein
- Length
- 262 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P19491
- Ligands
- OUB, LI, SO4, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 262 | — | P19491 |
Ligands and binding sites
- OUB · (S)-1-(2'-amino-2'-carboxyethyl)furo[3,4-d]pyrimidin-2, 4-dione · ligand · chains A
- LI · Lithium ion · metal · chains A
- SO4 · Sulfate ion · ion · 4 copies · chains A
- CL · Chloride ion · ion · 2 copies · chains A
- GOL · Glycerol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YK6 · Structure of the AMPA receptor GluA2o ligand-binding domain (S1S2J) in complex with the… · the same entry in another collection · chain A against A, TM-score 1.00
- P19491 · AlphaFold monomer V2.0 prediction for glutamate receptor 2 (P19491) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P19491
- Elsewhere: RCSB PDB 6YK6 · PDBe 6YK6 · UniProt P19491
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