MolNFT v1 · #170685 · protein
Solid-state NMR structure of the D-ARG4,L10-teixobactin - lipid II complex in lipid bilayers
6YFY: “Solid-state NMR structure of the D-ARG4,L10-teixobactin - lipid II complex in lipid bilayers”. Solid-state nmr, 4 ligands (P1W, 2PO, MUB). MolNFT v1 #170685 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YFY
- Type
- protein
- Length
- 64 residues
- Chains
- 8
- Method
- solid-state nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- P1W, 2PO, MUB, NAG
Structure
solid-state nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, E, F | — | protein | 11 | — | — |
| C, D, G, H | — | protein | 5 | — | — |
Ligands and binding sites
- P1W · 3-methylbut-2-en-1-ol · ligand · 12 copies · chains A, B, D, E, F
- 2PO · Phosphonate · ligand · 8 copies · chains A, B, E, F
- MUB · N-acetyl-alpha-muramic acid · ligand · 4 copies · chains A, C, B, E, D, G, F, H
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 4 copies · chains C, D, G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YFY · Solid-state NMR structure of the D-Arg4,L10-teixobactin - Lipid II complex in lipid… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6YFY · PDBe 6YFY
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