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Ligand · P1W

P1W · 3-methylbut-2-en-1-ol

P1W, 3-methylbut-2-en-1-ol (C5 H10 O, 86.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
P1W
Formula
C5 H10 O
Class
ligand
Structures
4
PDB entries
2

Binding sites

P1W in 4 structures; the first of them:

  • 6YFY · Solid-state NMR structure of the D-Arg4,L10-teixobactin - Lipid II complex in lipid… · P1W A103 · binds ILE6, SER7, ALA9, LEU10
  • 7QGV · Solid-state NMR structure of Teixobactin-Lipid II. · P1W A103 · binds ILE6, SER7, DTH8, ALA9
  • 6YFY · Solid-state NMR structure of the D-ARG4,L10-teixobactin - lipid II complex in lipid… · P1W I103 · binds ILE6, SER7, ALA9
  • 7QGV · Solid-state NMR structure of teixobactin-lipid II · P1W A103 · binds ILE6, SER7, DTH8, ALA9

Residues it binds most

ILE 34, ALA 18, 28J 10, SER 6, DTH 4, LYS 4, ZAE 4, LEU 3 (residue and the binding sites it lines).

Found with

  • 2PO · Phosphonate
  • MUB · N-acetyl-alpha-muramic acid
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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