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Ligand · 2PO

2PO · Phosphonate

2PO, Phosphonate (H O3 P -2, 80.0 g/mol), in the MolNFT structures on GenesisL1: bound in 12 records (7 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
2PO
Formula
H O3 P -2
Class
ligand
Structures
12
PDB entries
7

Binding sites

2PO in 12 structures; the first of them:

  • 5JVB · 1.95A resolution structure of PtxB from Trichodesmium erythraeum IMS101 in complex with… · 2PO A301 · binds TYR55, GLY73, PRO74, TYR100, SER130, THR131, SER132, HIS160 and 1 more
  • 5O2J · Pseudomonas stutzeri PtxB in complex with phosphite to 1.52 A resolution · 2PO A301 · binds LEU14, TYR49, GLY67, PRO68, TYR94, ALA123, SER124, THR125 and 4 more
  • 6OC9 · S8 phosphorylated beta amyloid 40 fibrils · 2PO A101 · binds ARG5, ASP7, SER8, GLY9, VAL24, GLU3, GLY25
  • 6TRQ · S.c. Scavenger Decapping Enzyme DcpS in complex with the capped RNA dinucleotide m7G-GU · 2PO A401 · binds ASP22, ASN24, THR27, VAL29
  • 7QGV · Solid-state NMR structure of Teixobactin-Lipid II. · 2PO A101 · binds ALA9, EI410
  • 8HSN · Crystal structure of DFA I-forming Inulin Lyase from Streptomyces peucetius subsp.… · 2PO A515
  • 5JVB · 1.95A resolution structure of ptxb from trichodesmium erythraeum IMS101 in complex with… · 2PO A301 · binds LEU20, TYR55, GLY73, PRO74, TYR100, ALA129, SER130, THR131 and 4 more
  • 5O2J · Pseudomonas stutzeri ptxb in complex with phosphite to 1.52 a resolution · 2PO A301 · binds LEU14, TYR49, GLY67, PRO68, TYR94, SER124, THR125, SER126 and 2 more
  • 6OC9 · S8 phosphorylated beta amyloid 40 fibrils · 2PO A101 · binds ARG5, ASP7, SER8, GLU3, GLY25
  • 6TRQ · S.C. scavenger decapping enzyme dcps in complex with the capped RNA dinucleotide M7G-gu · 2PO A401 · binds ASP22, ASN24, VAL29

Residues it binds most

SER 41, GLU 21, GLY 20, ALA 25, TYR 13, ASP 19, ILE 22, DTH 18, HIS 16, ASN 6 (residue and the binding sites it lines).

Found with

  • MUB · N-acetyl-alpha-muramic acid
  • P1W · 3-methylbut-2-en-1-ol
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • EDO · 1,2-ethanediol
  • 0G · L-guanosine-5'-monophosphate
  • M7G · 7N-methyl-8-hydroguanosine-5'-diphosphate
  • U · Uridine-5'-monophosphate
  • SO4 · Sulfate ion
  • 1PE · Pentaethylene glycol
  • GOL · Glycerol
  • PEG · Di(hydroxyethyl)ether

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