MolNFT v1 · #170621 · protein

Saftsz-UCM152 (COMP.20)

6YD6: “Saftsz-UCM152 (COMP.20)”. X-ray diffraction, 4 ligands (GDP, OMW, MB3). MolNFT v1 #170621 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6YD6
Type: protein
Length: 307 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P0A031
Ligands: GDP, OMW, MB3, K

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	307	—	P0A031

Ligands and binding sites

GDP · Guanosine-5'-diphosphate · ligand · chains A
OMW · 2,6-bis(fluoranyl)-3-[[3-(trifluoromethyl) phenyl]methoxy]benzamide · ligand · chains A
MB3 · 1-methylpyrrolidin-2-one · ligand · chains A
K · Potassium ion · metal · chains A
EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6YD6 · SaFtsZ-UCM152 (comp.20) · the same entry in another collection · chain A against A, TM-score 1.00
P0A031 · AlphaFold monomer V2.0 prediction for cell division protein ftsz (P0A031) · a predicted model of the same protein · chain A against A, TM-score 0.89

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A031
Elsewhere: RCSB PDB 6YD6 · PDBe 6YD6 · UniProt P0A031

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