MolNFT v1 · #170464 · protein
Crystal structure of the camp-dependent protein kinase a cocrystallized with ATP and pki (5-24)
6Y8C: “Crystal structure of the camp-dependent protein kinase a cocrystallized with ATP and pki (5-24)”. X-ray diffraction, 2 ligands (ATP, MG). MolNFT v1 #170464 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6Y8C
- Type
- protein
- Length
- 357 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P25321, P63248
- Ligands
- ATP, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 339 | — | P25321 |
| B | — | protein | 18 | — | P63248 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · chains A
- MG · Magnesium ion · metal · chains A
- DMS · Dimethyl sulfoxide · additive · 5 copies · chains A, B
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6Y8C · Crystal structure of the cAMP-dependent protein kinase A cocrystallized with ATP and PKI… · the same entry in another collection · chain A against A, TM-score 1.00
- P63248 · AlphaFold monomer V2.0 prediction for camp-dependent protein kinase inhibitor alpha… · a predicted model of the same protein · chain B against A, TM-score 0.44
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25321
- Every structure of UniProt P63248
- Elsewhere: RCSB PDB 6Y8C · PDBe 6Y8C · UniProt P25321 · UniProt P63248
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