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MolNFT v1 · #170461 · protein

Crystal structure of the camp-dependent protein kinase a cocrystallized with methyl 5-isoquinolinecarboxylate and pki (5-24)

6Y89: “Crystal structure of the camp-dependent protein kinase a cocrystallized with methyl 5-isoquinolinecarboxylate…”. X-ray diffraction, 1 ligand (OGB). MolNFT v1 #170461 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6Y89
Type
protein
Length
358 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P25321, P63248
Ligands
OGB

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein339—P25321
B—protein19—P63248

Ligands and binding sites

  • OGB · methyl isoquinoline-5-carboxylate · ligand · chains A
  • MRD · (4R)-2-methylpentane-2,4-diol · additive · 2 copies · chains A
  • MOH · Methanol · additive · 2 copies · chains A
  • MPD · (4S)-2-methyl-2,4-pentanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6Y89 · Crystal structure of the cAMP-dependent protein kinase A cocrystallized with Methyl… · the same entry in another collection · chain A against A, TM-score 1.00
  • P63248 · AlphaFold monomer V2.0 prediction for camp-dependent protein kinase inhibitor alpha… · a predicted model of the same protein · chain B against A, TM-score 0.42

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