MolNFT v1 · #169547 · protein
Crystal structure of the type III secretion system pilotin-secretin complex invh-invg
6XFK · Type 3 secretion system pilotin: “Crystal structure of the type III secretion system pilotin-secretin complex invh-invg”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #169547 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6XFK
- Type
- protein
- Length
- 74 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Type 3 secretion system pilotin; Type 3 secretion system secretin
- UniProt
- P0CL43, P35672
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains · 82% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Type 3 secretion system pilotin | protein | 63 | 83% helix, 0% strand | P0CL43 |
| B | Type 3 secretion system secretin | protein | 11 | 82% helix, 0% strand | P35672 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 725 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 6XFK · Crystal structure of the type III secretion system pilotin-secretin complex InvH-InvG · the same entry in another collection · chain A against A, TM-score 1.00
- P0CL43 · AlphaFold monomer V2.0 prediction for spi-1 type 3 secretion system pilotin (P0CL43) · a predicted model of the same protein · chain A against A, TM-score 0.96
- P35672 · AlphaFold monomer V2.0 prediction for spi-1 type 3 secretion system secretin (P35672) · a predicted model of the same protein · chain B against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CL43
- Every structure of UniProt P35672
- Elsewhere: RCSB PDB 6XFK · PDBe 6XFK · UniProt P0CL43 · UniProt P35672
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