MolNFT v1 · #422195 · protein
AlphaFold monomer V2.0 prediction for spi-1 type 3 secretion system pilotin (P0CL43)
P0CL43: “AlphaFold monomer V2.0 prediction for spi-1 type 3 secretion system pilotin (P0CL43)”. 3 pockets (best druggability 0.48). MolNFT v1 #422195 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P0CL43
- Type
- protein
- Length
- 147 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x234294862B3cf379fDB96E48e9B87af08B673d87
- Molecule
- Spi-1 type 3 secretion system pilotin
- UniProt
- P0CL43
- Pockets
- 3 · best druggability 0.48
Structure
1 distinct chain · 59% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Spi-1 type 3 secretion system pilotin | protein | 147 | 59% helix, 1% strand | P0CL43 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 202 | 0.48 | 0.75 | 26 | empty |
| 2 | 101 | 0.36 | 0.74 | 21 | empty |
| 3 | 104 | 0.34 | 0.73 | 17 | empty |
Compared structures
- 6XFJ · Crystal structure of the type III secretion pilotin InvH · an experimental structure of the same protein · chain A against C, TM-score 0.44
- 6XFJ · Crystal structure of the type III secretion pilotin invh · an experimental structure of the same protein · chain A against B, TM-score 0.44
- 6XFK · Crystal structure of the type III secretion system pilotin-secretin complex invh-invg · an experimental structure of the same protein · chain A against A, TM-score 0.42
- 6XFK · Crystal structure of the type III secretion system pilotin-secretin complex InvH-InvG · an experimental structure of the same protein · chain A against A, TM-score 0.42
- 6XFL · Structural characterization of the type III secretion system pilotin-secretin complex… · an experimental structure of the same protein · chain A against A, TM-score 0.41
- 6XFL · Structural characterization of the type III secretion system pilotin- secretin complex… · an experimental structure of the same protein · chain A against A, TM-score 0.41
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CL43
- Elsewhere: UniProt P0CL43 · AlphaFold DB P0CL43
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