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Crystal structure of the type III secretion system pilotin-secretin complex invh-invg

Analyse Crystal structure of the type III secretion system pilotin-secretin complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6XFK
Type
protein
Length
74 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Type 3 secretion system pilotin; Type 3 secretion system secretin
UniProt
P0CL43, P35672
Ligands
SO4

Structure

x-ray diffraction · 2 distinct chains · 82% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AType 3 secretion system pilotinprotein6383% helix, 0% strandP0CL43
BType 3 secretion system secretinprotein1182% helix, 0% strandP35672

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 725 Ų buried · 6 hydrogen bonds · protein-protein

Compared structures

  • 6XFK · Crystal structure of the type III secretion system pilotin-secretin complex InvH-InvG · the same entry in another collection · chain A against A, TM-score 1.00
  • P0CL43 · AlphaFold monomer V2.0 prediction for spi-1 type 3 secretion system pilotin (P0CL43) · a predicted model of the same protein · chain A against A, TM-score 0.96
  • P35672 · AlphaFold monomer V2.0 prediction for spi-1 type 3 secretion system secretin (P35672) · a predicted model of the same protein · chain B against A, TM-score 0.86

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