MolNFT v1 · #169325 · protein
Crystal structure of TYK2 with compound 22
6X8G · Non-receptor tyrosine-protein kinase TYK2: “Crystal structure of TYK2 with compound 22”. X-ray diffraction, 1 ligand (UWM), 2 pockets (best druggability 0.66). MolNFT v1 #169325 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6X8G
- Type
- protein
- Length
- 282 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Non-receptor tyrosine-protein kinase TYK2
- EC
- 2.7.10.2
- UniProt
- P29597
- Ligands
- UWM
- Pockets
- 2 · best druggability 0.66
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Non-receptor tyrosine-protein kinase TYK2 (EC 2.7.10.2) | protein | 282 | 42% helix, 21% strand | P29597 |
Ligands and binding sites
- UWM · trans-3-(cyanomethyl)-3-{4-[6-(1-methyl-1H-pyrazol-4-yl)pyrazolo[1,5-a]pyrazin-4-yl]-1H-pyrazol-1-yl}cyclobutane-1-carbonitrile · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 221 | 0.66 | 0.84 | 35 | UWM |
| 2 | 129 | 0.56 | 0.83 | 31 | empty |
Modifications
Observed in the structure: 1 modified (phosphorylation).
Compared structures
- 6X8G · Crystal structure of TYK2 with Compound 22 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29597
- Elsewhere: RCSB PDB 6X8G · PDBe 6X8G · UniProt P29597
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