MolNFT v1 · #169286 · protein + DNA

REV1 R518A ternary complex with dctp and CA2+

6X77: “REV1 R518A ternary complex with dctp and CA2+”. X-ray diffraction, 2 ligands (DCP, CA). MolNFT v1 #169286 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6X77
Type: protein + DNA
Length: 466 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P12689
Ligands: DCP, CA

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
P	—	dna	12	—	—
T	—	dna	16	—	—
A	—	protein	438	—	P12689

Ligands and binding sites

DCP · 2'-deoxycytidine-5'-triphosphate · ligand · chains P, A
CA · Calcium ion · metal · 3 copies · chains P, A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6X77 · Rev1 R518A Ternary Complex with dCTP and Ca2+ · the same entry in another collection · chain P against P, TM-score 1.00
P12689 · AlphaFold monomer V2.0 prediction for DNA repair protein REV1 (P12689) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P12689
Elsewhere: RCSB PDB 6X77 · PDBe 6X77 · UniProt P12689

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