MolNFT v1 · #168049 · protein + DNA
APE1 exonuclease substrate complex R237C
6W3U: “APE1 exonuclease substrate complex R237C”. X-ray diffraction, 3 ligands (CA, NA, CL). MolNFT v1 #168049 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6W3U
- Type
- protein + DNA
- Length
- 594 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P27695
- Ligands
- CA, NA, CL
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C | — | dna | 11 | — | — |
| D | — | dna | 10 | — | — |
| E | — | dna | 21 | — | — |
| A, B | — | protein | 276 | — | P27695 |
Ligands and binding sites
- CA · Calcium ion · metal · chains D
- NA · Sodium ion · metal · chains A
- CL · Chloride ion · ion · chains A
- EDO · 1,2-ethanediol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P27695
- Elsewhere: RCSB PDB 6W3U · PDBe 6W3U · UniProt P27695
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