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MolNFT v1 · #167760 · protein + DNA

Diabody bound to a reverse transcriptase aptamer complex

6VUG: “Diabody bound to a reverse transcriptase aptamer complex”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #167760 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6VUG
Type
protein + DNA
Length
1,219 residues
Chains
5
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P03366, A0A076Q3N8
Ligands
SO4

Structure

x-ray diffraction · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein532—P03366
B—protein419—A0A076Q3N8
C—protein110——
D—protein124——
E—dna34——

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 11 copies · chains B, C, D, A
  • GOL · Glycerol · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6VUG · Diabody bound to a Reverse Transcriptase Aptamer Complex · the same entry in another collection · chain A against A, TM-score 1.00

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