MolNFT v1 · #167577 · protein
Artificial metalloproteins with dinuclear iron centers
6VP2: “Artificial metalloproteins with dinuclear iron centers”. X-ray diffraction, 2 ligands (KM3, AZI). MolNFT v1 #167577 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VP2
- Type
- protein
- Length
- 496 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P22629
- Ligands
- KM3, AZI
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 124 | — | P22629 |
Ligands and binding sites
- KM3 · {N-(4-{bis[(pyridin-2-yl-kappaN)methyl]amino-kappaN}butyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}iron(3+) · ligand · 4 copies · chains A, D, B, C
- AZI · Azide ion · ion · 2 copies
- ACT · Acetate ion · additive · 2 copies · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6VP2 · Artificial Metalloproteins with Dinuclear Iron Centers · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P22629
- Elsewhere: RCSB PDB 6VP2 · PDBe 6VP2 · UniProt P22629
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