MolNFT v1 · #167413 · protein
Cryoem structure of HRD1-USA1/DER1/HRD3 complex of the expected topology
6VJZ: “Cryoem structure of HRD1-USA1/DER1/HRD3 complex of the expected topology”. Electron microscopy. MolNFT v1 #167413 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6VJZ
- Type
- protein
- Length
- 1,093 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P38307, Q08109, Q05787, Q03714
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C | — | protein | 165 | — | P38307 |
| B | — | protein | 280 | — | Q08109 |
| A | — | protein | 603 | — | Q05787 |
| D | — | protein | 45 | — | Q03714 |
Compared structures
- 6VJZ · CryoEM structure of Hrd1-Usa1/Der1/Hrd3 complex of the expected topology · the same entry in another collection · chain D against D, TM-score 1.00
- Q05787 · AlphaFold monomer V2.0 prediction for erad-associated E3 ubiquitin- protein ligase… · a predicted model of the same protein · chain A against A, TM-score 0.99
- Q08109 · AlphaFold monomer V2.0 prediction for erad-associated E3 ubiquitin- protein ligase HRD1… · a predicted model of the same protein · chain B against A, TM-score 0.95
- P38307 · AlphaFold monomer V2.0 prediction for degradation in the endoplasmic reticulum protein 1… · a predicted model of the same protein · chain C against A, TM-score 0.87
- Q03714 · AlphaFold monomer V2.0 prediction for U1 SNP1-associating protein 1 (Q03714) · a predicted model of the same protein · chain D against A, TM-score 0.50
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P38307
- Every structure of UniProt Q08109
- Every structure of UniProt Q05787
- Every structure of UniProt Q03714
- Elsewhere: RCSB PDB 6VJZ · PDBe 6VJZ · UniProt P38307 · UniProt Q08109 · UniProt Q05787 · UniProt Q03714
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