MolNFT v1 · #166755 · protein
The structure of a red shifted photosystem I complex
6UZV: “The structure of a red shifted photosystem I complex”. Electron microscopy, 8 ligands (CLA, BCR, LHG). MolNFT v1 #166755 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UZV
- Type
- protein
- Length
- 6,711 residues
- Chains
- 33
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P29254, P32422, P19569, P12975, P29256, Q55330, Q55329, P37277, P72986, P74564
- Ligands
- CLA, BCR, LHG, LMG, SF4, PQN, CL0, CA
Structure
electron microscopy · 11 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, a, 1 | — | protein | 739 | — | P29254 |
| B, b, 2 | — | protein | 733 | — | — |
| C, c, 3 | — | protein | 80 | — | P32422 |
| D, d, 4 | — | protein | 138 | — | P19569 |
| E, e, 5 | — | protein | 68 | — | P12975 |
| F, f, 6 | — | protein | 141 | — | P29256 |
| I, i, h | — | protein | 37 | — | Q55330 |
| J, j, 7 | — | protein | 39 | — | Q55329 |
| L, l, 0 | — | protein | 153 | — | P37277 |
| M, m, 9 | — | protein | 30 | — | P72986 |
| K, k, 8 | — | protein | 79 | — | P74564 |
Ligands and binding sites
- CLA · Chlorophyll A · ligand · 288 copies · chains A, B, F, J, K, L, 0, b, m, M, I, 8, i, l, a, f, j, k, 2, 9, 1, 7, 6, h
- BCR · Beta-carotene · ligand · 69 copies · chains A, B, F, J, I, L, l, M, K, a, b, 1, 2, f, j, m, 6, 7, i, h, 0, k, 8, 9
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · ligand · 12 copies · chains A, E, B, I, M, 0, a, e, 1, 5, b, 2, L, i, m, h, l, 9
- LMG · 1,2-distearoyl-monogalactosyl-diglyceride · ligand · 12 copies · chains A, L, B, i, a, l, 9, 1, b, 2, h, I, 0
- SF4 · Iron/sulfur cluster · ligand · 9 copies · chains A, B, C, a, b, 1, 2, c, 3
- PQN · Phylloquinone · ligand · 6 copies · chains A, B, a, 1, b, 2
- CL0 · Chlorophyll A isomer · ligand · 3 copies · chains A, B, a, b, 1, 2
- CA · Calcium ion · metal · 3 copies · chains L, 0, a, l, 1
- LMT · Dodecyl-beta-D-maltoside · additive · 6 copies · chains A, F, I, 0, a, f, 1, 6, L, i, h, l
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UZV · The structure of a red shifted photosystem I complex · the same entry in another collection · chain K against K, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29254
- Every structure of UniProt P32422
- Every structure of UniProt P19569
- Every structure of UniProt P12975
- Every structure of UniProt P29256
- Every structure of UniProt Q55330
- Every structure of UniProt Q55329
- Every structure of UniProt P37277
- Every structure of UniProt P72986
- Every structure of UniProt P74564
- Elsewhere: RCSB PDB 6UZV · PDBe 6UZV · UniProt P29254 · UniProt P32422 · UniProt P19569 · UniProt P12975 · UniProt P29256 · UniProt Q55330 · UniProt Q55329 · UniProt P37277 · UniProt P72986 · UniProt P74564
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.