MolNFT v1 · #166489 · protein
HIV-1 nef in complex with the CD4 cytoplasmic domain and the AP2 clathrin adaptor complex
6URI: “HIV-1 nef in complex with the CD4 cytoplasmic domain and the AP2 clathrin adaptor complex”. X-ray diffraction. MolNFT v1 #166489 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6URI
- Type
- protein
- Length
- 1,531 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q66HM2, P53680, Q90VU7, P63010, Q96CW1, B4DT49
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 611 | — | Q66HM2 |
| S | — | protein | 142 | — | P53680 |
| N | — | protein | 164 | — | Q90VU7 |
| B | — | protein | 480 | — | P63010 |
| M | — | protein | 120 | — | Q96CW1 |
| D | — | protein | 14 | — | B4DT49 |
Compared structures
- 6URI · HIV-1 Nef in complex with the CD4 cytoplasmic domain and the AP2 clathrin adaptor complex · the same entry in another collection · chain D against D, TM-score 1.00
- P53680 · AlphaFold monomer V2.0 prediction for ap-2 complex subunit sigma (P53680) · a predicted model of the same protein · chain S against A, TM-score 0.98
- Q96CW1 · AlphaFold monomer V2.0 prediction for ap-2 complex subunit mu (Q96CW1) · a predicted model of the same protein · chain M against A, TM-score 0.96
- P63010 · AlphaFold monomer V2.0 prediction for ap-2 complex subunit beta (P63010) · a predicted model of the same protein · chain B against A, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q66HM2
- Every structure of UniProt P53680
- Every structure of UniProt Q90VU7
- Every structure of UniProt P63010
- Every structure of UniProt Q96CW1
- Every structure of UniProt B4DT49
- Elsewhere: RCSB PDB 6URI · PDBe 6URI · UniProt Q66HM2 · UniProt P53680 · UniProt Q90VU7 · UniProt P63010 · UniProt Q96CW1 · UniProt B4DT49
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