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MolNFT v1 · #166138 · protein

Crystal structure of the Fc fragment of PF06438179/GP1111 an infliximab biosimilar in a C-centered orthorhombic crystal form, lot a

6UGW · Pf-06438179/GP1111 Fc: “Crystal structure of the Fc fragment of PF06438179/GP1111 an infliximab biosimilar in a C-centered…”. X-ray diffraction, 6 ligands (NAG, MAN, BMA). MolNFT v1 #166138 on GenesisL1: 3D structure, binding sites…

PDB
6UGW
Type
protein
Length
207 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Pf-06438179/GP1111 Fc
UniProt
P0DOX5
Ligands
NAG, MAN, BMA, GAL, FUC, ZN

Structure

x-ray diffraction · 1 distinct chain · 11% helix, 48% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APf-06438179/GP1111 Fcprotein20711% helix, 48% strandP0DOX5

Ligands and binding sites

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains A
  • MAN · alpha-D-mannopyranose · sugar · 2 copies · chains A
  • BMA · beta-D-mannopyranose · sugar · chains A
  • GAL · beta-D-galactopyranose · sugar · chains A
  • FUC · alpha-L-fucopyranose · sugar · chains A
  • ZN · Zinc ion · metal · 3 copies · chains A
  • ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide, 1 glycan (disulfide, N-glycosylation).

Compared structures

  • 6UGW · Crystal structure of the Fc fragment of PF06438179/GP1111 an infliximab biosimilar in a… · the same entry in another collection · chain A against A, TM-score 1.00

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