MolNFT v1 · #166115 · protein
Complex of CH28/11 Fab and ssea-4 (hexagonal form)
6UG9: “Complex of CH28/11 Fab and ssea-4 (hexagonal form)”. X-ray diffraction, 5 ligands (GAL, BGC, GLA). MolNFT v1 #166115 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UG9
- Type
- protein
- Length
- 1,273 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- GAL, BGC, GLA, NGA, SIA
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| L, B, K | — | protein | 211 | — | — |
| H, A | — | protein | 212 | — | — |
| J | — | protein | 216 | — | — |
Ligands and binding sites
- GAL · beta-D-galactopyranose · sugar · 6 copies · chains L, H, A, B, K, J
- BGC · beta-D-glucopyranose · sugar · 3 copies · chains J
- GLA · alpha-D-galactopyranose · sugar · 3 copies · chains L, H, B, A, K, J
- NGA · 2-acetamido-2-deoxy-beta-D-galactopyranose · sugar · 3 copies · chains L, H, A, B, K, J
- SIA · N-acetyl-alpha-neuraminic acid · sugar · 3 copies · chains H, A, J
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UG9 · Complex of ch28/11 Fab and SSEA-4 (hexagonal form) · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6UG9 · PDBe 6UG9
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