MolNFT v1 · #166114 · protein
Complex of CH28/11 Fab and ssea-4 (monoclinic form)
6UG8: “Complex of CH28/11 Fab and ssea-4 (monoclinic form)”. X-ray diffraction, 5 ligands (GAL, BGC, GLA). MolNFT v1 #166114 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UG8
- Type
- protein
- Length
- 425 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- GAL, BGC, GLA, NGA, SIA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| L | — | protein | 212 | — | — |
| H | — | protein | 213 | — | — |
Ligands and binding sites
- GAL · beta-D-galactopyranose · sugar · 2 copies · chains L, H
- BGC · beta-D-glucopyranose · sugar
- GLA · alpha-D-galactopyranose · sugar · chains L, H
- NGA · 2-acetamido-2-deoxy-beta-D-galactopyranose · sugar · chains L, H
- SIA · N-acetyl-alpha-neuraminic acid · sugar · chains H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UG8 · Complex of ch28/11 Fab and SSEA-4 (monoclinic form) · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6UG8 · PDBe 6UG8
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