MolNFT v1 · #165437 · protein

Crystal structure of the haemagglutinin from a H10N7 seal influenza virus isolated in germany in complex with avian receptor analogue, 3'-sln

6TVD: “Crystal structure of the haemagglutinin from a H10N7 seal influenza virus isolated in germany in complex with…”. X-ray diffraction, 4 ligands (NAG, GAL, SIA). MolNFT v1 #165437 on GenesisL1: 3D structure, binding sites and pockets…

PDB: 6TVD
Type: protein
Length: 2,940 residues
Chains: 12
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: A0A0A7HR51
Ligands: NAG, GAL, SIA, CA

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	320	—	A0A0A7HR51
B, D, F, H, J, L	—	protein	172	—	A0A0A7HR51
C, E, I, K	—	protein	318	—	A0A0A7HR51
G	—	protein	316	—	A0A0A7HR51

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 24 copies · chains D, K, C, E, F, A, H, G, I, J, L, B
GAL · beta-D-galactopyranose · sugar · 6 copies · chains A, C, E, G, I, K
SIA · N-acetyl-alpha-neuraminic acid · sugar · 6 copies · chains A, C, E, G, I, K
CA · Calcium ion · metal · 3 copies · chains A, B, H, G, J, D, K, L

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6TVD · Crystal structure of the haemagglutinin from a H10N7 seal influenza virus isolated in… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0A7HR51
Elsewhere: RCSB PDB 6TVD · PDBe 6TVD · UniProt A0A0A7HR51

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