MolNFT v1 · #164908 · protein + DNA

Structure of SWI/SNF chromatin remodeler rsc bound to a nucleosome

6TDA: “Structure of SWI/SNF chromatin remodeler rsc bound to a nucleosome”. Electron microscopy, 1 ligand (ZN). MolNFT v1 #164908 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6TDA
Type: protein + DNA
Length: 5,137 residues
Chains: 23
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P84233, P62799, Q6AZJ8, P02281, Q06168, P43609, P32832, Q03124, P25632, Q07979, Q9URQ5, Q02206, P32597, Q12406, Q05123, P53330
Ligands: ZN

Structure

electron microscopy · 21 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	96	—	P84233
B	—	protein	87	—	P62799
C, G	—	protein	102	—	Q6AZJ8
D, H	—	protein	92	—	P02281
E	—	protein	95	—	P84233
F	—	protein	82	—	P62799
I	—	dna	160	—	—
J	—	dna	160	—	—
K	—	protein	235	—	Q06168
L	—	protein	596	—	P43609
M	—	protein	108	—	P32832
N	—	protein	367	—	Q03124
O	—	protein	212	—	P25632
P	—	protein	347	—	Q07979
Q	—	protein	58	—	Q9URQ5
R	—	protein	131	—	Q02206
S	—	protein	783	—	P32597
T	—	protein	399	—	Q12406
U	—	protein	396	—	Q05123
V	—	protein	54	—	P53330
X	—	protein	383	—	—

Ligands and binding sites

ZN · Zinc ion · metal · chains L

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6TDA · Structure of SWI/SNF chromatin remodeler RSC bound to a nucleosome · the same entry in another collection · chain J against J, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P84233
Every structure of UniProt P62799
Every structure of UniProt Q6AZJ8
Every structure of UniProt P02281
Every structure of UniProt Q06168
Every structure of UniProt P43609
Every structure of UniProt P32832
Every structure of UniProt Q03124
Every structure of UniProt P25632
Every structure of UniProt Q07979
Every structure of UniProt Q9URQ5
Every structure of UniProt Q02206
Every structure of UniProt P32597
Every structure of UniProt Q12406
Every structure of UniProt Q05123
Every structure of UniProt P53330
Elsewhere: RCSB PDB 6TDA · PDBe 6TDA · UniProt P84233 · UniProt P62799 · UniProt Q6AZJ8 · UniProt P02281 · UniProt Q06168 · UniProt P43609 · UniProt P32832 · UniProt Q03124 · UniProt P25632 · UniProt Q07979 · UniProt Q9URQ5 · UniProt Q02206 · UniProt P32597 · UniProt Q12406 · UniProt Q05123 · UniProt P53330

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