MolNFT v1 · #164735 · protein
Rcr E3 ligase E2-ubiquitin transthiolation intermediate
6T7F: “Rcr E3 ligase E2-ubiquitin transthiolation intermediate”. X-ray diffraction, 2 ligands (LWZ, ZN). MolNFT v1 #164735 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6T7F
- Type
- protein
- Length
- 471 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O75592, P61077, P0CG48
- Ligands
- LWZ, ZN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 250 | — | O75592 |
| B | — | protein | 150 | — | P61077 |
| C | — | protein | 71 | — | P0CG48 |
Ligands and binding sites
- LWZ · 3,3-bis(sulfanyl)-~{N}-(1~{H}-1,2,3-triazol-4-ylmethyl)propanamide · ligand · chains A, B, C
- ZN · Zinc ion · metal · 6 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6T7F · RCR E3 ligase E2-Ubiquitin transthiolation intermediate · the same entry in another collection · chain A against A, TM-score 1.00
- P61077 · AlphaFold monomer V2.0 prediction for ubiquitin-conjugating enzyme E2 D3 (P61077) · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O75592
- Every structure of UniProt P61077
- Every structure of UniProt P0CG48
- Elsewhere: RCSB PDB 6T7F · PDBe 6T7F · UniProt O75592 · UniProt P61077 · UniProt P0CG48
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