MolNFT v1 · #164603 · protein
Crystal structure of the PTPN3 PDZ domain bound to the HBV core protein C-terminal peptide
6T36 · Tyrosine-protein phosphatase non-receptor type 3: “Crystal structure of the PTPN3 PDZ domain bound to the HBV core protein C-terminal peptide”. X-ray diffraction, 1 ligand (BR). MolNFT v1 #164603 on GenesisL1: 3D structure, binding…
- PDB
- 6T36
- Type
- protein
- Length
- 101 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tyrosine-protein phosphatase non-receptor type 3; Capsid protein
- EC
- 3.1.3.48
- UniProt
- P26045, A8D6S6
- Ligands
- BR
Structure
x-ray diffraction · 2 distinct chains · 17% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tyrosine-protein phosphatase non-receptor type 3 (EC 3.1.3.48) | protein | 93 | 18% helix, 38% strand | P26045 |
| B | Capsid protein | protein | 8 | 0% helix, 38% strand | A8D6S6 |
Ligands and binding sites
- BR · Bromide ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 573 Ų buried · 19 hydrogen bonds · protein-protein
Compared structures
- 6T36 · Crystal structure of the PTPN3 PDZ domain bound to the HBV core protein C-terminal peptide · the same entry in another collection · chain A against A, TM-score 1.00
- P26045 · AlphaFold monomer V2.0 prediction for tyrosine-protein phosphatase non-receptor type 3… · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P26045
- Every structure of UniProt A8D6S6
- Elsewhere: RCSB PDB 6T36 · PDBe 6T36 · UniProt P26045 · UniProt A8D6S6
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