MolNFT v1 · #164372 · protein
Crystal structure of human gfat-1 in complex with glucose-6-phosphate, L-glu, and udp-galnac
6SVM: “Crystal structure of human gfat-1 in complex with glucose-6-phosphate, L-glu, and udp-galnac”. X-ray diffraction, 3 ligands (G6Q, UD2, MG). MolNFT v1 #164372 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6SVM
- Type
- protein
- Length
- 1,316 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q06210
- Ligands
- G6Q, UD2, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 661 | — | Q06210 |
| B | — | protein | 655 | — | Q06210 |
Ligands and binding sites
- G6Q · Glucose-6-phosphate · ligand · 2 copies · chains A, B
- UD2 · Uridine-diphosphate-N-acetylgalactosamine · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6SVM · Crystal structure of human GFAT-1 in complex with Glucose-6-Phosphate, L-Glu, and… · the same entry in another collection · chain B against B, TM-score 1.00
- Q06210 · AlphaFold monomer V2.0 prediction for glutamine--fructose-6-phosphate aminotransferase… · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06210
- Elsewhere: RCSB PDB 6SVM · PDBe 6SVM · UniProt Q06210
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