MolNFT v1 · #163404 · protein

Crystal structure of the tggalnac-T3 in complex with udp, manganese and FGF23C

6S22: “Crystal structure of the tggalnac-T3 in complex with udp, manganese and FGF23C”. X-ray diffraction, 5 ligands (UDP, NAG, NGA). MolNFT v1 #163404 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6S22
Type: protein
Length: 541 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: H0ZAB5, Q9GZV9
Ligands: UDP, NAG, NGA, MN, SO4

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	529	—	H0ZAB5
F	—	protein	12	—	Q9GZV9

Ligands and binding sites

UDP · Uridine-5'-diphosphate · ligand · chains A, F
NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
NGA · 2-acetamido-2-deoxy-beta-D-galactopyranose · sugar · chains A, F
MN · Manganese (II) ion · metal · chains A
SO4 · Sulfate ion · ion · chains A
EDO · 1,2-ethanediol · additive · 14 copies · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6S22 · Crystal structure of the TgGalNAc-T3 in complex with UDP, manganese and FGF23c · the same entry in another collection · chain A against A, TM-score 1.00
Q9GZV9 · AlphaFold monomer V2.0 prediction for fibroblast growth factor 23 (Q9GZV9) · a predicted model of the same protein · chain F against A, TM-score 0.29

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt H0ZAB5
Every structure of UniProt Q9GZV9
Elsewhere: RCSB PDB 6S22 · PDBe 6S22 · UniProt H0ZAB5 · UniProt Q9GZV9

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