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MolNFT v1 · #162791 · protein

Human transketolase variant T382E

6RJB: “Human transketolase variant T382E”. X-ray diffraction, 4 ligands (TPP, MG, CA). MolNFT v1 #162791 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6RJB
Type
protein
Length
1,242 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P29401
Ligands
TPP, MG, CA, NA

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein620—P29401
B—protein622—P29401

Ligands and binding sites

  • TPP · Thiamine diphosphate · ligand · 2 copies · chains A, B
  • MG · Magnesium ion · metal · 2 copies · chains A, B
  • CA · Calcium ion · metal · 2 copies · chains A, B
  • NA · Sodium ion · metal · 2 copies · chains A
  • EDO · 1,2-ethanediol · additive · 40 copies · chains A, B
  • GOL · Glycerol · additive · 2 copies · chains A, B
  • PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6RJB · Human transketolase variant T382E · the same entry in another collection · chain A against A, TM-score 1.00
  • P29401 · AlphaFold monomer V2.0 prediction for transketolase (P29401) · a predicted model of the same protein · chain B against A, TM-score 0.99

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