MolNFT v1 · #162384 · protein
Crystal structure of LTC4S in complex with AZ13690257
6R7D: “Crystal structure of LTC4S in complex with AZ13690257”. X-ray diffraction, 3 ligands (PLM, JUQ, NI). MolNFT v1 #162384 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6R7D
- Type
- protein
- Length
- 1,790 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q16873
- Ligands
- PLM, JUQ, NI
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, E, G, J | — | protein | 149 | — | Q16873 |
| C, I, L | — | protein | 148 | — | Q16873 |
| D, F, K | — | protein | 150 | — | Q16873 |
| H | — | protein | 151 | — | Q16873 |
Ligands and binding sites
- PLM · Palmitic acid · ligand · 43 copies · chains A, C, B, E, D, F, G, H, I, J, L, K
- JUQ · (1~{S},2~{S})-2-[5-[cyclopropylmethyl(naphthalen-1-yl) amino]-4-methoxy-pyrimidin-2-yl]carbonylcyclopropane-1-carboxylic acid · ligand · 12 copies · chains A, C, B, D, F, E, G, I, H, J, L, K
- NI · Nickel (II) ion · metal · 8 copies · chains A, B, C, F, D, E, G, H, I, J, K, L
- LMT · Dodecyl-beta-D-maltoside · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6R7D · Crystal structure of LTC4S in complex with AZ13690257 · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q16873
- Elsewhere: RCSB PDB 6R7D · PDBe 6R7D · UniProt Q16873
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