MolNFT v1 · #162242 · protein
Structure of the lecb lectin from pseudomonas aeruginosa strain PAO1 in complex with lewis X tetrasaccharide
6R35: “Structure of the lecb lectin from pseudomonas aeruginosa strain PAO1 in complex with lewis X tetrasaccharide”. X-ray diffraction, 5 ligands (NAG, FUC, GAL). MolNFT v1 #162242 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6R35
- Type
- protein
- Length
- 456 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9HYN5
- Ligands
- NAG, FUC, GAL, CA, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D, A, B, C | — | protein | 114 | — | Q9HYN5 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 4 copies · chains D, C, A, B
- FUC · alpha-L-fucopyranose · sugar · 4 copies · chains D, C, A, B
- GAL · beta-D-galactopyranose · sugar · 4 copies · chains D, C, A, B
- CA · Calcium ion · metal · 8 copies · chains D, C, A, B
- SO4 · Sulfate ion · ion · 2 copies · chains D, C
- EDO · 1,2-ethanediol · additive · 8 copies · chains D, A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6R35 · Structure of the LecB lectin from Pseudomonas aeruginosa strain PAO1 in complex with… · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HYN5
- Elsewhere: RCSB PDB 6R35 · PDBe 6R35 · UniProt Q9HYN5
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