MolNFT v1 · #160984 · protein
MERS-cov S structure in complex with sialyl-lewisx
6Q05: “MERS-cov S structure in complex with sialyl-lewisx”. Electron microscopy, 6 ligands (NAG, MAN, BMA). MolNFT v1 #160984 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6Q05
- Type
- protein
- Length
- 3,480 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- K0BRG7
- Ligands
- NAG, MAN, BMA, GAL, SIA, FUC
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 1160 | — | K0BRG7 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 84 copies · chains A, C, B
- MAN · alpha-D-mannopyranose · sugar · 30 copies · chains C, A, B
- BMA · beta-D-mannopyranose · sugar · 18 copies · chains C, A, B
- GAL · beta-D-galactopyranose · sugar · 3 copies
- SIA · N-acetyl-alpha-neuraminic acid · sugar · 3 copies · chains A, B, C
- FUC · alpha-L-fucopyranose · sugar · 3 copies
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6Q05 · MERS-CoV S structure in complex with sialyl-lewisX · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt K0BRG7
- Elsewhere: RCSB PDB 6Q05 · PDBe 6Q05 · UniProt K0BRG7
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