MolNFT v1 · #160201 · protein
Tyrosine-protein kinase lck bound to compound 11
6PDJ: “Tyrosine-protein kinase lck bound to compound 11”. X-ray diffraction, 3 ligands (ODJ, NI, SO4). MolNFT v1 #160201 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PDJ
- Type
- protein
- Length
- 274 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P06239
- Ligands
- ODJ, NI, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 274 | — | P06239 |
Ligands and binding sites
- ODJ · N-{4-[(6-methoxypyrazolo[1,5-a]pyridine-3-carbonyl) amino]-3-methylphenyl}-1-methyl-1H-indazole-3-carboxamide · ligand · chains A
- NI · Nickel (II) ion · metal · chains A
- SO4 · Sulfate ion · ion · 2 copies · chains A
- CXS · 3-cyclohexyl-1-propylsulfonic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PDJ · Tyrosine-protein kinase LCK bound to Compound 11 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06239
- Elsewhere: RCSB PDB 6PDJ · PDBe 6PDJ · UniProt P06239
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