MolNFT v1 · #159524 · protein

Calmodulin in complex with farnesyl cysteine methyl ester

6OS4 · Calmodulin-1: “Calmodulin in complex with farnesyl cysteine methyl ester”. X-ray diffraction, 2 ligands (5U0, CA), 1 pocket (best druggability 0.75). MolNFT v1 #159524 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6OS4
Type: protein
Length: 144 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Calmodulin-1
UniProt: P0DP23
Ligands: 5U0, CA
Pockets: 1 · best druggability 0.75

Structure

x-ray diffraction · 1 distinct chain · 60% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Calmodulin-1	protein	144	60% helix, 4% strand	P0DP23

Ligands and binding sites

5U0 · s-farnesyl-l-cysteine methyl ester · ligand · chains A
CA · Calcium ion · metal · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	900	0.75	0.78	52	5U0

Compared structures

6OS4 · Calmodulin in complex with farnesyl cysteine methyl ester · the same entry in another collection · chain A against A, TM-score 1.00
P0DP23 · AlphaFold monomer V2.0 prediction for calmodulin-1 (P0DP23) · a predicted model of the same protein · chain A against A, TM-score 0.51

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0DP23
Elsewhere: RCSB PDB 6OS4 · PDBe 6OS4 · UniProt P0DP23

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