MolNFT v1 · #158997 · protein
Crystal structure of G13D-KRAS (gmppnp-bound) in complex with gap- related domain (grd) of neurofibromin (NF1)
6OB3: “Crystal structure of G13D-KRAS (gmppnp-bound) in complex with gap- related domain (grd) of neurofibromin (NF1)”. X-ray diffraction, 3 ligands (GNP, MG, CL). MolNFT v1 #158997 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6OB3
- Type
- protein
- Length
- 828 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P01116, P21359
- Ligands
- GNP, MG, CL
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 170 | — | P01116 |
| B | — | protein | 245 | — | P21359 |
| C | — | protein | 166 | — | P01116 |
| D | — | protein | 247 | — | P21359 |
Ligands and binding sites
- GNP · Phosphoaminophosphonic acid-guanylate ester · ligand · 2 copies · chains A, B, C, D
- MG · Magnesium ion · metal · 2 copies · chains A, C
- CL · Chloride ion · ion · 3 copies · chains B, C
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · 5 copies · chains B, D, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6OB3 · Crystal structure of G13D-KRAS (GMPPNP-bound) in complex with GAP-related domain (GRD) of… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01116
- Every structure of UniProt P21359
- Elsewhere: RCSB PDB 6OB3 · PDBe 6OB3 · UniProt P01116 · UniProt P21359
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