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MolNFT v1 · #158641 · protein

Structure and mechanism of acetylation by the N-terminal dual enzyme NATA/NAA50 complex

6O07: “Structure and mechanism of acetylation by the N-terminal dual enzyme NATA/NAA50 complex”. X-ray diffraction, 3 ligands (ACO, IHP, CL). MolNFT v1 #158641 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6O07
Type
protein
Length
1,101 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q08689, G2WCC0, P07347
Ligands
ACO, IHP, CL

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
C—protein139—Q08689
A—protein763—G2WCC0
B—protein199—P07347

Ligands and binding sites

  • ACO · Acetyl coenzyme *A · ligand · chains C
  • IHP · Inositol hexakisphosphate · ligand · chains A, B
  • CL · Chloride ion · ion · 18 copies · chains C, A, B
  • GOL · Glycerol · additive · 8 copies · chains C, A, B
  • MLI · Malonate ion · additive · 4 copies · chains A, B
  • EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6O07 · Structure and mechanism of acetylation by the N-terminal dual enzyme NatA/Naa50 complex · the same entry in another collection · chain C against C, TM-score 1.00
  • Q08689 · AlphaFold monomer V2.0 prediction for N-alpha-acetyltransferase NAT5 (Q08689) · a predicted model of the same protein · chain C against A, TM-score 0.96
  • P07347 · AlphaFold monomer V2.0 prediction for N-terminal acetyltransferase a complex catalytic… · a predicted model of the same protein · chain B against A, TM-score 0.89

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