MolNFT v1 · #158239 · protein
ADP bound to K114BD mutant ATP-grasp fold of blastocystis hominis succinyl-CoA synthetase
6NO2: “ADP bound to K114BD mutant ATP-grasp fold of blastocystis hominis succinyl-CoA synthetase”. X-ray diffraction, 3 ligands (ADP, MG, CL). MolNFT v1 #158239 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NO2
- Type
- protein
- Length
- 456 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B3FHP0
- Ligands
- ADP, MG, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 228 | — | B3FHP0 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
- CL · Chloride ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6NO2 · ADP bound to K114bD mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase · the same entry in another collection · chain A against A, TM-score 1.00
- B3FHP0 · AlphaFold monomer V2.0 prediction for succinate--CoA ligase [ADP- forming] subunit beta… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3FHP0
- Elsewhere: RCSB PDB 6NO2 · PDBe 6NO2 · UniProt B3FHP0
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