MolNFT v1 · #440570 · protein
AlphaFold monomer V2.0 prediction for succinate--CoA ligase [ADP- forming] subunit beta (B3FHP0)
B3FHP0 · Succinate--CoA ligase [ADP-forming] subunit beta: “AlphaFold monomer V2.0 prediction for succinate--CoA ligase [ADP- forming] subunit beta (B3FHP0)”. 2 pockets (best druggability 0.73). MolNFT v1 #440570 on GenesisL1: 3D…
- Accession
- B3FHP0
- Type
- protein
- Length
- 416 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD0f9B7bFD62aab6d4A30D170A574DcF201F3f893
- Molecule
- Succinate--CoA ligase [ADP-forming] subunit beta
- UniProt
- B3FHP0
- Pockets
- 2 · best druggability 0.73
Structure
1 distinct chain · 38% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Succinate--CoA ligase [ADP-forming] subunit beta | protein | 416 | 38% helix, 27% strand | B3FHP0 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 959 | 0.73 | 0.77 | 82 | empty |
| 2 | 160 | 0.43 | 0.74 | 25 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 6NO5 · ADP bound to K46BE&K114BD mutant ATP-grasp fold of blastocystis hominis succinyl-CoA… · an experimental structure of the same protein · chain A against A, TM-score 0.56
- 6NO5 · ADP bound to K46bE&K114bD mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA… · an experimental structure of the same protein · chain A against A, TM-score 0.56
- 6NO3 · ADP bound to V113bL mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase · an experimental structure of the same protein · chain A against B, TM-score 0.56
- 6NO6 · K46BE&K114BD mutant ATP-grasp fold of blastocystis hominis succinyl- CoA synthetase · an experimental structure of the same protein · chain A against B, TM-score 0.56
- 6NO6 · K46bE&K114bD mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase · an experimental structure of the same protein · chain A against B, TM-score 0.56
- 6NO3 · ADP bound to V113BL mutant ATP-grasp fold of blastocystis hominis succinyl-CoA synthetase · an experimental structure of the same protein · chain A against A, TM-score 0.55
- 6NO1 · ADP bound to K46BE mutant ATP-grasp fold of blastocystis hominis succinyl-CoA synthetase · an experimental structure of the same protein · chain A against A, TM-score 0.55
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3FHP0
- Elsewhere: UniProt B3FHP0 · AlphaFold DB B3FHP0
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