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MolNFT v1 · #157948 · protein

Crystal structure of the cancer genomic DNA mutator APOBEC3B with loop 7 from APOBEC3G bound to iodide

6NFK: “Crystal structure of the cancer genomic DNA mutator APOBEC3B with loop 7 from APOBEC3G bound to iodide”. X-ray diffraction, 1 ligand (IOD). MolNFT v1 #157948 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6NFK
Type
protein
Length
182 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9UH17
Ligands
IOD

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein182—Q9UH17

Ligands and binding sites

  • IOD · Iodide ion · ion · chains A
  • EDO · 1,2-ethanediol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6NFK · Crystal Structure of the Cancer Genomic DNA Mutator APOBEC3B with loop 7 from APOBEC3G… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9UH17 · AlphaFold monomer V2.0 prediction for DNA dc->du-editing enzyme apobec-3B (Q9UH17) · a predicted model of the same protein · chain A against A, TM-score 0.95

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