MolNFT v1 · #156341 · protein + DNA + RNA
Crystal structure of streptococcus thermophilus CAS9 in complex with the agaa pam
6M0W: “Crystal structure of streptococcus thermophilus CAS9 in complex with the agaa pam”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #156341 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6M0W
- Type
- protein + DNA + RNA
- Length
- 1,139 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q03LF7
- Ligands
- MG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | rna | 71 | — | — |
| C | — | dna | 28 | — | — |
| D | — | dna | 8 | — | — |
| A | — | protein | 1032 | — | Q03LF7 |
Ligands and binding sites
- MG · Magnesium ion · metal · 5 copies · chains B, C, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6M0W · Crystal structure of Streptococcus thermophilus Cas9 in complex with the AGAA PAM · the same entry in another collection · chain B against B, TM-score 1.00
- Q03LF7 · AlphaFold monomer V2.0 prediction for CRISPR-associated endonuclease CAS9 1 (Q03LF7) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q03LF7
- Elsewhere: RCSB PDB 6M0W · PDBe 6M0W · UniProt Q03LF7
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