Research workbench
Crystal structure of streptococcus thermophilus CAS9 in complex with the agaa pam
Analyse Crystal structure of streptococcus thermophilus CAS9 in complex with the agaa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6M0W
- Type
- protein + DNA + RNA
- Length
- 1,139 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q03LF7
- Ligands
- MG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | rna | 71 | — | — |
| C | — | dna | 28 | — | — |
| D | — | dna | 8 | — | — |
| A | — | protein | 1032 | — | Q03LF7 |
Ligands and binding sites
- MG · Magnesium ion · metal · 5 copies · chains B, C, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6M0W · Crystal structure of Streptococcus thermophilus Cas9 in complex with the AGAA PAM · the same entry in another collection · chain B against B, TM-score 1.00
- Q03LF7 · AlphaFold monomer V2.0 prediction for CRISPR-associated endonuclease CAS9 1 (Q03LF7) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q03LF7
- Elsewhere: RCSB PDB 6M0W · PDBe 6M0W · UniProt Q03LF7
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