MolNFT v1 · #156236 · protein
Crystal structure of Z2B3 Fab in complex with influenza virus neuraminidase from A/BREVIG MISSION/1/1918 (H1N1)
6LXI: “Crystal structure of Z2B3 Fab in complex with influenza virus neuraminidase from A/BREVIG MISSION/1/1918…”. X-ray diffraction, 5 ligands (NAG, BMA, MAN). MolNFT v1 #156236 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6LXI
- Type
- protein
- Length
- 1,627 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9IGQ6
- Ligands
- NAG, BMA, MAN, FUC, CA
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 387 | — | Q9IGQ6 |
| H | — | protein | 232 | — | — |
| L | — | protein | 211 | — | — |
| C | — | protein | 214 | — | — |
| D | — | protein | 196 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 4 copies · chains A, H, B, C
- BMA · beta-D-mannopyranose · sugar · 2 copies · chains H, C
- MAN · alpha-D-mannopyranose · sugar · 2 copies · chains H, C
- FUC · alpha-L-fucopyranose · sugar · 2 copies · chains A, H, B, C
- CA · Calcium ion · metal · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6LXI · Crystal structure of Z2B3 Fab in complex with influenza virus neuraminidase from A/Brevig… · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9IGQ6
- Elsewhere: RCSB PDB 6LXI · PDBe 6LXI · UniProt Q9IGQ6
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