MolNFT v1 · #154147 · protein + DNA
Human nucleosome core particle with H2A.X variant
6K1J: “Human nucleosome core particle with H2A.X variant”. X-ray diffraction, 2 ligands (MN, CL). MolNFT v1 #154147 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6K1J
- Type
- protein + DNA
- Length
- 1,069 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P68431, P62805, P16104, P06899
- Ligands
- MN, CL
Structure
x-ray diffraction · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 98 | — | P68431 |
| B | — | protein | 82 | — | P62805 |
| C | — | protein | 112 | — | P16104 |
| D | — | protein | 97 | — | P06899 |
| F | — | protein | 87 | — | P62805 |
| G | — | protein | 110 | — | P16104 |
| H | — | protein | 95 | — | P06899 |
| I | — | dna | 145 | — | — |
| J | — | dna | 145 | — | — |
Ligands and binding sites
- MN · Manganese (II) ion · metal · 12 copies · chains D, I, J
- CL · Chloride ion · ion · 2 copies · chains C, D, G, H, I
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P68431
- Every structure of UniProt P62805
- Every structure of UniProt P16104
- Every structure of UniProt P06899
- Elsewhere: RCSB PDB 6K1J · PDBe 6K1J · UniProt P68431 · UniProt P62805 · UniProt P16104 · UniProt P06899
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.