MolNFT v1 · #153269 · protein

Structure of MOEN5-SSO7D fusion protein in complex with lig 1

6J8W: “Structure of MOEN5-SSO7D fusion protein in complex with lig 1”. X-ray diffraction, 1 ligand (C0X). MolNFT v1 #153269 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6J8W
Type: protein
Length: 1,159 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: A0A010, P39476
Ligands: C0X

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	260	—	A0A010, P39476
B	—	protein	333	—	A0A010, P39476
C	—	protein	262	—	A0A010, P39476
D	—	protein	304	—	A0A010, P39476

Ligands and binding sites

C0X · (2S)-3-dimethoxyphosphoryloxy-2-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propanoic acid · ligand · 2 copies · chains C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6J8W · Structure of MOEN5-SSO7D fusion protein in complex with lig 1 · the same entry in another collection · chain D against D, TM-score 1.00
P39476 · AlphaFold monomer V2.0 prediction for DNA-binding protein 7D (P39476) · a predicted model of the same protein · chain B against A, TM-score 0.18

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A010
Every structure of UniProt P39476
Elsewhere: RCSB PDB 6J8W · PDBe 6J8W · UniProt A0A010 · UniProt P39476

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