GL1X · GenesisL1 explorer

MolNFT v1 · #153141 · protein

Structural basis of tubulin detyrosination by vasohibins-svbp enzyme complex and functional implications

6J4S: “Structural basis of tubulin detyrosination by vasohibins-svbp enzyme complex and functional implications”. X-ray diffraction, 1 ligand (PO4). MolNFT v1 #153141 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6J4S
Type
protein
Length
282 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q86V25, Q8N300
Ligands
PO4

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein250—Q86V25
B—protein32—Q8N300

Ligands and binding sites

  • PO4 · Phosphate ion · ion · chains A
  • GOL · Glycerol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6J4S · Structural basis of tubulin detyrosination by vasohibins-SVBP enzyme complex and… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q86V25 · AlphaFold monomer V2.0 prediction for tubulinyl-tyr carboxypeptidase 2 (Q86V25) · a predicted model of the same protein · chain A against A, TM-score 0.99
  • Q8N300 · AlphaFold monomer V2.0 prediction for small vasohibin-binding protein (Q8N300) · a predicted model of the same protein · chain B against A, TM-score 0.80

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