MolNFT v1 · #152687 · protein

Fyn SH3 domain R96W mutant, crystallized with 18-crown-6

6IPZ · Tyrosine-protein kinase fyn: “Fyn SH3 domain R96W mutant, crystallized with 18-crown-6”. X-ray diffraction, 1 ligand (O4B). MolNFT v1 #152687 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6IPZ
Type: protein
Length: 63 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tyrosine-protein kinase fyn
EC: 2.7.10.2
UniProt: P06241
Ligands: O4B

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 43% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
Z	Tyrosine-protein kinase fyn (EC 2.7.10.2)	protein	63	5% helix, 43% strand	P06241

Ligands and binding sites

O4B · 1,4,7,10,13,16-hexaoxacyclooctadecane · ligand · 2 copies · chains Z

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6IPZ · Fyn SH3 domain R96W mutant, crystallized with 18-crown-6 · the same entry in another collection · chain Z against Z, TM-score 1.00
P06241 · AlphaFold monomer V2.0 prediction for tyrosine-protein kinase fyn (P06241) · a predicted model of the same protein · chain Z against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P06241
Elsewhere: RCSB PDB 6IPZ · PDBe 6IPZ · UniProt P06241

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