MolNFT v1 · #152575 · protein

RV2361C complex with substrate analogues

6IME: “RV2361C complex with substrate analogues”. X-ray diffraction, 5 ligands (GST, ISY, MG). MolNFT v1 #152575 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6IME
Type: protein
Length: 570 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P9WFF7
Ligands: GST, ISY, MG, CL, CO3

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	—	protein	285	—	P9WFF7

Ligands and binding sites

GST · Geranyl S-thiolodiphosphate · ligand · 2 copies · chains A, B
ISY · 3-methylbut-3-enylsulfanyl(phosphonooxy)phosphinic acid · ligand · chains A, B
MG · Magnesium ion · metal · 2 copies · chains A, B
CL · Chloride ion · ion · chains B
CO3 · Carbonate ion · ion · chains B
DTT · 2,3-dihydroxy-1,4-dithiobutane · additive · chains B
GOL · Glycerol · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6IME · Rv2361c complex with substrate analogues · the same entry in another collection · chain A against A, TM-score 1.00
P9WFF7 · AlphaFold monomer V2.0 prediction for decaprenyl diphosphate synthase (P9WFF7) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P9WFF7
Elsewhere: RCSB PDB 6IME · PDBe 6IME · UniProt P9WFF7

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.